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GrainGenes Marker Report: k08627

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Locus	k08627
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 148
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH34N22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = ACCGGAACTCRCTGCCGAATC Parent 1 SNP sequence = ACCGGAACTCGCTGCCGAATC Parent 2 SNP sequence = ACCGGAACTCACTGCCGAATC SNP = T/C SNP structure (UNICODE) = CTTCAGCTGCYGCTGCAGCGG Parent 1 SNP sequence = CTTCAGCTGCTGCTGCAGCGG Parent 2 SNP sequence = CTTCAGCTGCCGCTGCAGCGG
Probe for Locus	BaH34N22
Locus	k08627
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = cell division cycle protein 48, putative / CDC48, putative [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - CAAATCCACCGAATCATGTG Right 5' - GAGGGAGGGATCAGTTGTGA
Sequence	AL509370
PCR size	353