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GrainGenes Marker Report: k08604

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Locus	k08604
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 36.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaH50O06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 22 ] SNP = A/T SNP structure (UNICODE) = CGCCCAGCCGWTATGCAATCT Parent 1 SNP sequence = CGCCCAGCCGATATGCAATCT Parent 2 SNP sequence = CGCCCAGCCGTTATGCAATCT SNP = C/T SNP structure (UNICODE) = ATATGATCCAYTTTTCATGAT Parent 1 SNP sequence = ATATGATCCACTTTTCATGAT Parent 2 SNP sequence = ATATGATCCATTTTTCATGAT SNP = C/A SNP structure (UNICODE) = TCATGTATACMGGGAAGGAAG Parent 1 SNP sequence = TCATGTATACCGGGAAGGAAG Parent 2 SNP sequence = TCATGTATACAGGGAAGGAAG SNP structure (UNICODE) = ACATGCATACWTGTTATAAAT Parent 1 SNP sequence = ACATGCATACATGTTATAAAT Parent 2 SNP sequence = ACATGCATACTTGTTATAAAT SNP structure (UNICODE) = GTATGTCGCAWTTGATCTAAA Parent 1 SNP sequence = GTATGTCGCAATTGATCTAAA Parent 2 SNP sequence = GTATGTCGCATTTGATCTAAA SNP = T/C SNP structure (UNICODE) = CTCGTTATATYTGTACAGGTC Parent 1 SNP sequence = CTCGTTATATTTGTACAGGTC Parent 2 SNP sequence = CTCGTTATATCTGTACAGGTC
Probe for Locus	BaH50O06
Locus	k08604
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - CGAGTTGCTCATTCCTGTCA Right 5' - AATGAGACATTTGAAGGCGG
PCR size	353