GrainGenes Marker Report: k08440
Locus
k08440
Type
SNP
Chromosome
1H
Map
Hv-HNxH602-1H 296.7
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
BaGS29H13
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = A/G SNP structure (UNICODE) = TGGGGGCACCRACCTTTCGGA Parent 1 SNP sequence = TGGGGGCACCAACCTTTCGGA Parent 2 SNP sequence = TGGGGGCACCGACCTTTCGGA SNP structure (UNICODE) = TGTGAGGGACRAGTCAATACT Parent 1 SNP sequence = TGTGAGGGACAAGTCAATACT Parent 2 SNP sequence = TGTGAGGGACGAGTCAATACT
Probe for Locus
BaGS29H13
Locus
k08440
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = P0007F06.9 [Oryza sativa (japonica cultivar-group)] dbj BAB84370.1 P0007F06.9 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CGTGCTGTTTACAACCAACG
Right 5' - GGCCGTACCCAGATATTCAA
PCR size
355
GrainGenes Marker Report: k08440
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