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GrainGenes Marker Report: k08232

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Locus	k08232
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 324.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS9B14
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 21 ] SNP = G/A SNP structure (UNICODE) = ATGTGCAGCARATGAGATGAG Parent 1 SNP sequence = ATGTGCAGCAGATGAGATGAG Parent 2 SNP sequence = ATGTGCAGCAAATGAGATGAG SNP = A/G SNP structure (UNICODE) = CTGCCCAGATRTATGATTAGG Parent 1 SNP sequence = CTGCCCAGATATATGATTAGG Parent 2 SNP sequence = CTGCCCAGATGTATGATTAGG SNP structure (UNICODE) = GGAATGGAATRTGCGAAATAG Parent 1 SNP sequence = GGAATGGAATATGCGAAATAG Parent 2 SNP sequence = GGAATGGAATGTGCGAAATAG SNP structure (UNICODE) = GATTTAAAAGRCTTCTTCCAG Parent 1 SNP sequence = GATTTAAAAGGCTTCTTCCAG Parent 2 SNP sequence = GATTTAAAAGACTTCTTCCAG SNP = C/T SNP structure (UNICODE) = AGATGAGAAAYGACGCGACAC Parent 1 SNP sequence = AGATGAGAAACGACGCGACAC Parent 2 SNP sequence = AGATGAGAAATGACGCGACAC SNP structure (UNICODE) = ACTCACATACRCAGCTTTCAA Parent 1 SNP sequence = ACTCACATACGCAGCTTTCAA Parent 2 SNP sequence = ACTCACATACACAGCTTTCAA
Probe for Locus	BaGS9B14
Locus	k08232
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GGTGGGCTGAAAGACATCAT Right 5' - ATCAGAGTGGAGGGGAAGGT
PCR size	425