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GrainGenes Marker Report: k08184

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Locus	k08184
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 39
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS19O23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = YGACCGTGCCRTCTTTCGAGC Parent 1 SNP sequence = CGACCGTGCCGTCTTTCGAGC Parent 2 SNP sequence = TGACCGTGCCATCTTTCGAGC SNP = C/T SNP structure (UNICODE) = GCTTGGGTGCYGCCAGAAGYG Parent 1 SNP sequence = GCTTGGGTGCCGCCAGAAGCG Parent 2 SNP sequence = GCTTGGGTGCTGCCAGAAGTG
Probe for Locus	BaGS19O23
Locus	k08184
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = beta-glucosidase (EC 3.2.1.21), chloroplast - rice
Type	PCR
PCR primers	Left 5' - AAAACGGAGCGTCATTGGT Right 5' - AGTGGTTCGGCGACTTCTC
Sequence	AV922174
PCR size	376