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GrainGenes Marker Report: k08071

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Locus	k08071
Type	CAPS
Chromosome	6H
Map	Hv-HNxH602-6H 167.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS19I11
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HindIII SNP = T/A SNP structure (UNICODE) = ATGCTGTTAAWGCTTGACGAT Parent 1 SNP sequence = ATGCTGTTAATGCTTGACGAT Parent 2 SNP sequence = ATGCTGTTAAAGCTTGACGAT Recognized sequence for CAPs locus = AAGCTT
Probe for Locus	BaGS19I11
Locus	k08071
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GCTCCCACAGCAAATAGCTC Right 5' - TAAGAACAAGAACACCCCGC
Sequence	AV834539
PCR size	296