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GrainGenes Marker Report: k07622

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Locus	k07622
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 273.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaGS19J21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = A/G SNP structure (UNICODE) = ACTGCGGCACRCTCCAGGTCT Parent 1 SNP sequence = ACTGCGGCACACTCCAGGTCT Parent 2 SNP sequence = ACTGCGGCACGCTCCAGGTCT SNP = C/T SNP structure (UNICODE) = GAGTGCCAAGYTTCCATAGCA Parent 1 SNP sequence = GAGTGCCAAGCTTCCATAGCA Parent 2 SNP sequence = GAGTGCCAAGTTTCCATAGCA SNP = T/C SNP structure (UNICODE) = GGCTTGGAGTYGGAGGTACTG Parent 1 SNP sequence = GGCTTGGAGTTGGAGGTACTG Parent 2 SNP sequence = GGCTTGGAGTCGGAGGTACTG
Probe for Locus	BaGS19J21
Locus	k07622
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative glycosyltransferase [Oryza sativa (japonica cultivar-group)] dbj BAD03445.1 putative glycosyltransferase [Oryza sativa (japonica c
Type	PCR
PCR primers	Left 5' - CAACATTCACTGGCACAACC Right 5' - TTTGTCAATGTGGGAGTGGA
Sequence	AV922076
PCR size	390