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GrainGenes Marker Report: k07036

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Locus	k07036
Type	CAPS
Chromosome	3H
Map	Hv-HNxH602-3H 207.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL25P17
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 10 ] Restriction enzyme used for CAPS analysis = MboI SNP = A/G SNP structure (UNICODE) = TGGCGAAGTGRCAACTGATCT Parent 1 SNP sequence = TGGCGAAGTGACAACTGATCT Parent 2 SNP sequence = TGGCGAAGTGGCAACTGATCT Recognized sequence for CAPs locus = GATC SNP = C/T SNP structure (UNICODE) = TGGGTGCTGAYCAACGACACA Parent 1 SNP sequence = TGGGTGCTGACCAACGACACA Parent 2 SNP sequence = TGGGTGCTGATCAACGACACA
Probe for Locus	BaAL25P17
Locus	k07036
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGTATGGCATCCAACCATCTG Right 5' - AGCTTAAGAGGTGGCGTGAA
Sequence	BJ475501
PCR size	384