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GrainGenes Marker Report: k06974

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Locus	k06974
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 268.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL13B22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = G/A SNP structure (UNICODE) = CATCAGGTTGRAATATGCCGG Parent 1 SNP sequence = CATCAGGTTGGAATATGCCGG Parent 2 SNP sequence = CATCAGGTTGAAATATGCCGG SNP = C/T SNP structure (UNICODE) = TTGACATGGTYGGTCGATCGT Parent 1 SNP sequence = TTGACATGGTCGGTCGATCGT Parent 2 SNP sequence = TTGACATGGTTGGTCGATCGT SNP structure (UNICODE) = TTGAACTAATRCAGAAATATA Parent 1 SNP sequence = TTGAACTAATGCAGAAATATA Parent 2 SNP sequence = TTGAACTAATACAGAAATATA
Probe for Locus	BaAL13B22
Locus	k06974
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = receptor kinase-like protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACAGACTCGAAATGGGGATG Right 5' - TGAGCCAATCACCTACCCTC
Sequence	BJ474311
PCR size	380