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GrainGenes Marker Report: k06887

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Locus	k06887
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 45.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL32B22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 34 ] SNP = A/C SNP structure (UNICODE) = TTAGTCGTCCMTATATCTTTT Parent 1 SNP sequence = TTAGTCGTCCATATATCTTTT Parent 2 SNP sequence = TTAGTCGTCCCTATATCTTTT SNP = G/A SNP structure (UNICODE) = CATCATCTCTRTTGTATACTT Parent 1 SNP sequence = CATCATCTCTGTTGTATACTT Parent 2 SNP sequence = CATCATCTCTATTGTATACTT SNP = C/T SNP structure (UNICODE) = TGTATACTTGYCACACACCCG Parent 1 SNP sequence = TGTATACTTGCCACACACCCG Parent 2 SNP sequence = TGTATACTTGTCACACACCCG SNP = G/C SNP structure (UNICODE) = ACGAAGTGCTSAGAGATAATA Parent 1 SNP sequence = ACGAAGTGCTGAGAGATAATA Parent 2 SNP sequence = ACGAAGTGCTCAGAGATAATA SNP structure (UNICODE) = ACAAAATGACMTGTTAATACA Parent 1 SNP sequence = ACAAAATGACATGTTAATACA Parent 2 SNP sequence = ACAAAATGACCTGTTAATACA SNP = T/C SNP structure (UNICODE) = ACTTAGTTGAYGGGTTAAAAG Parent 1 SNP sequence = ACTTAGTTGATGGGTTAAAAG Parent 2 SNP sequence = ACTTAGTTGACGGGTTAAAAG SNP = T/G SNP structure (UNICODE) = CCACTGATATKATAGTACCTA Parent 1 SNP sequence = CCACTGATATTATAGTACCTA Parent 2 SNP sequence = CCACTGATATGATAGTACCTA SNP = A/G SNP structure (UNICODE) = GTGACGGGTTRCCCAAATATA Parent 1 SNP sequence = GTGACGGGTTACCCAAATATA Parent 2 SNP sequence = GTGACGGGTTGCCCAAATATA SNP structure (UNICODE) = CACTCAATATRTATACTACTT Parent 1 SNP sequence = CACTCAATATGTATACTACTT Parent 2 SNP sequence = CACTCAATATATATACTACTT
Probe for Locus	BaAL32B22
Locus	k06887
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TCAAACCAGCCTTTACCACC Right 5' - AGTCCGTGGTCTCCAACAAC
Sequence	BJ476121
PCR size	373