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GrainGenes Marker Report: k06868

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Locus	k06868
Type	SNP
Chromosome	3H
Map	Hv-HNxH602-3H 292.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAL34P18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/T SNP structure (UNICODE) = AAATCCCCACKAAAAACTTAT Parent 1 SNP sequence = AAATCCCCACGAAAAACTTAT Parent 2 SNP sequence = AAATCCCCACTAAAAACTTAT SNP = G/A SNP structure (UNICODE) = TCTCGCCGACRTAGTACTCGT Parent 1 SNP sequence = TCTCGCCGACGTAGTACTCGT Parent 2 SNP sequence = TCTCGCCGACATAGTACTCGT SNP = T/G SNP structure (UNICODE) = AACTTATTCAKCTCTTGAACC Parent 1 SNP sequence = AACTTATTCATCTCTTGAACC Parent 2 SNP sequence = AACTTATTCAGCTCTTGAACC
Probe for Locus	BaAL34P18
Locus	k06868
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = putative cytochrome B5 [Oryza sativa (japonica cultivar-group)] dbj BAB63673.1 putative cytochrome B5 [Oryza sativa (japonica cultivar-grou
Type	PCR
PCR primers	Left 5' - CATGACGGATGGCCTATCTT Right 5' - GATGCGGTTATGAGGGCTAA
Sequence	BJ548756
PCR size	361