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GrainGenes Marker Report: k06820

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Locus	k06820
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 7.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK1L23
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 13 ] Restriction enzyme used for CAPS analysis = DdeI SNP = T/- SNP structure (UNICODE) = AANATGTGATT/-CCTATANNNN Parent 1 SNP sequence = AANATGTGATTCCTATANNNN Parent 2 SNP sequence = AANATGTGAT-CCTATANNNN SNP = N/G SNP structure (UNICODE) = CCACTCTTGAN/GCACATCTTCA Parent 1 SNP sequence = CCACTCTTGANCACATCTTCA Parent 2 SNP sequence = CCACTCTTGAGCACATCTTCA SNP = A/G SNP structure (UNICODE) = TCTTGATGACRATCATGTGTT Parent 1 SNP sequence = TCTTGATGACAATCATGTGTT Parent 2 SNP sequence = TCTTGATGACGATCATGTGTT
Probe for Locus	BaAK1L23
Locus	k06820
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - GAAAAGCATGGCCCTATGAA Right 5' - AGTGGTTGTTGGTTGCATGA
PCR size	377