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GrainGenes Marker Report: k06720

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Locus	k06720
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 220.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK20E08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 14 ] SNP = A/G SNP structure (UNICODE) = CTATCCAAGARGTTGAACATC Parent 1 SNP sequence = CTATCCAAGAAGTTGAACATC Parent 2 SNP sequence = CTATCCAAGAGGTTGAACATC SNP structure (UNICODE) = CGCGGAGGCCRATGGTGTAGT Parent 1 SNP sequence = CGCGGAGGCCAATGGTGTAGT Parent 2 SNP sequence = CGCGGAGGCCGATGGTGTAGT SNP = G/T SNP structure (UNICODE) = CCACCTCGTAKGGGATCTCCG Parent 1 SNP sequence = CCACCTCGTAGGGGATCTCCG Parent 2 SNP sequence = CCACCTCGTATGGGATCTCCG SNP structure (UNICODE) = AATCAACCCARGGTGAAATTG Parent 1 SNP sequence = AATCAACCCAAGGTGAAATTG Parent 2 SNP sequence = AATCAACCCAGGGTGAAATTG
Probe for Locus	BaAK20E08
Locus	k06720
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 50S ribosomal protein L5 [Oryza sativa]
Type	PCR
PCR primers	Left 5' - GGGAAGCGATCCATCTATCA Right 5' - GATTTGGGCATGGAGGACTA
Sequence	BJ456250
PCR size	410