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GrainGenes Marker Report: k06611

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Locus	k06611
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 102.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK34J19
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = TTTTCTTCTTKTAGTGTGTTT Parent 1 SNP sequence = TTTTCTTCTTGTAGTGTGTTT Parent 2 SNP sequence = TTTTCTTCTTTTAGTGTGTTT SNP = T/G SNP structure (UNICODE) = TGAAGAAACAKGAACAATATA Parent 1 SNP sequence = TGAAGAAACATGAACAATATA Parent 2 SNP sequence = TGAAGAAACAGGAACAATATA
Probe for Locus	BaAK34J19
Locus	k06611
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = thioesterase family protein [Arabidopsis thaliana] pir B96523 F11A17.13 [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - ACTCCGGCATGTGACCTAAC Right 5' - AGGGGAGTATGTCGCAGTTG
Sequence	BJ459085
PCR size	293