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GrainGenes Marker Report: k06154

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Locus	k06154
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 156.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	BaAK13G12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/T SNP structure (UNICODE) = GGACGGGTACWTCTTCCTCAG Parent 1 SNP sequence = GGACGGGTACATCTTCCTCAG Parent 2 SNP sequence = GGACGGGTACTTCTTCCTCAG SNP = G/A SNP structure (UNICODE) = CGGCGGCTCCRAACACGGAGC Parent 1 SNP sequence = CGGCGGCTCCGAACACGGAGC Parent 2 SNP sequence = CGGCGGCTCCAAACACGGAGC SNP structure (UNICODE) = CGACGCGGCCRCGTCGATGGT Parent 1 SNP sequence = CGACGCGGCCGCGTCGATGGT Parent 2 SNP sequence = CGACGCGGCCACGTCGATGGT
Probe for Locus	BaAK13G12
Locus	k06154
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = Chain A, The Structure Of The Cytosolic D-Ribulose-5-Phosphate 3-Epimerase From Rice Complexed With Sulfate
Type	PCR
PCR primers	Left 5' - AAAACACGACCAGGCTTGAG Right 5' - TGCCAAAGACCTATCCATCG
Sequence	BU992110
PCR size	352