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GrainGenes Marker Report: k04655

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Locus	k04655
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 296.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah63f05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = T/C SNP structure (UNICODE) = GTATGCTATGYTGTGCAACAA Parent 1 SNP sequence = GTATGCTATGTTGTGCAACAA Parent 2 SNP sequence = GTATGCTATGCTGTGCAACAA SNP = C/G SNP structure (UNICODE) = GTTTCCCCTASGACATTATAT Parent 1 SNP sequence = GTTTCCCCTACGACATTATAT Parent 2 SNP sequence = GTTTCCCCTAGGACATTATAT SNP = C/A SNP structure (UNICODE) = TTCCCCTCGAMACCGTATGGA Parent 1 SNP sequence = TTCCCCTCGACACCGTATGGA Parent 2 SNP sequence = TTCCCCTCGAAACCGTATGGA
Probe for Locus	bah63f05
Locus	k04655
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0018M05.18 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - AACTATCGCCACCACCAAAC Right 5' - AGATCAGCAACGGTTATGCC
Sequence	BJ486855
PCR size	386