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GrainGenes Marker Report: k04523

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Locus	k04523
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 257.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah59j07
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 33 ] SNP = G/C SNP structure (UNICODE) = AGCTAGTTCASACATCGTCCT Parent 1 SNP sequence = AGCTAGTTCAGACATCGTCCT Parent 2 SNP sequence = AGCTAGTTCACACATCGTCCT SNP = A/G SNP structure (UNICODE) = GGAATCTTGGRTAGTTGGAGC Parent 1 SNP sequence = GGAATCTTGGATAGTTGGAGC Parent 2 SNP sequence = GGAATCTTGGGTAGTTGGAGC SNP = T/A SNP structure (UNICODE) = TCCATGACGAWTCCACACACC Parent 1 SNP sequence = TCCATGACGATTCCACACACC Parent 2 SNP sequence = TCCATGACGAATCCACACACC SNP structure (UNICODE) = GGTACTGGCARCATCCATGAC Parent 1 SNP sequence = GGTACTGGCAACATCCATGAC Parent 2 SNP sequence = GGTACTGGCAGCATCCATGAC SNP = G/A SNP structure (UNICODE) = TCCTCTTGCTRTCTTACAGTC Parent 1 SNP sequence = TCCTCTTGCTGTCTTACAGTC Parent 2 SNP sequence = TCCTCTTGCTATCTTACAGTC SNP structure (UNICODE) = AGACAAAGAARATTGCAAGTC Parent 1 SNP sequence = AGACAAAGAAGATTGCAAGTC Parent 2 SNP sequence = AGACAAAGAAAATTGCAAGTC SNP = G/T SNP structure (UNICODE) = CAGGTCGTTCKGGGGAAGCAG Parent 1 SNP sequence = CAGGTCGTTCGGGGGAAGCAG Parent 2 SNP sequence = CAGGTCGTTCTGGGGAAGCAG SNP = C/T SNP structure (UNICODE) = CTGCTTGAAAYATCACCATAA Parent 1 SNP sequence = CTGCTTGAAACATCACCATAA Parent 2 SNP sequence = CTGCTTGAAATATCACCATAA SNP structure (UNICODE) = CAAATGCCTTRTGTGCACTGC Parent 1 SNP sequence = CAAATGCCTTGTGTGCACTGC Parent 2 SNP sequence = CAAATGCCTTATGTGCACTGC
Probe for Locus	bah59j07
Locus	k04523
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TTGTGTGTGTTTGTGTCCGA Right 5' - CCGAATGGGTAGAGCAAGAC
PCR size	376