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GrainGenes Marker Report: k04310

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Locus
k04310
Type
SNP
Chromosome
1H
Map
Hv-HNxH602-1H143.1
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare
Hordeum vulgare subsp. spontaneum
Probe
bah46g14
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ]
SNP = G/A
SNP structure (UNICODE) = AAATCAATGARCAGGTAGAAT
Parent 1 SNP sequence = AAATCAATGAGCAGGTAGAAT
Parent 2 SNP sequence = AAATCAATGAACAGGTAGAAT
SNP structure (UNICODE) = AGCTCAGATCRAAACCGGCTT
Parent 1 SNP sequence = AGCTCAGATCGAAACCGGCTT
Parent 2 SNP sequence = AGCTCAGATCAAAACCGGCTT



Probe for Locus
bah46g14
Locus
k04310
Reference
ReferenceSato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = CG3356-PA [Drosophila melanogaster] gb AAF47181.1 CG3356-PA [Drosophila melanogaster]
Type
PCR
PCR primers
Left 5' - TGGCTGTGGTCCATTAAACA
Right 5' - TTTTTGCCCATAGCACCATT
Sequence
BJ483637
PCR size
386