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GrainGenes Marker Report: k04091

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Locus	k04091
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 66.3
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah39n18
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/G SNP structure (UNICODE) = GCAGACACTGKGGCACCAGAC Parent 1 SNP sequence = GCAGACACTGTGGCACCAGAC Parent 2 SNP sequence = GCAGACACTGGGGCACCAGAC SNP = G/T SNP structure (UNICODE) = GAACGTGTCGKGAAACCTCGA Parent 1 SNP sequence = GAACGTGTCGGGAAACCTCGA Parent 2 SNP sequence = GAACGTGTCGTGAAACCTCGA
Probe for Locus	bah39n18
Locus	k04091
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = prolyl oligopeptidase family protein [Arabidopsis thaliana] dbj BAB10391.1 dipeptidyl peptidase IV-like protein [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - GGCAAGGGAAAACAATCAAC Right 5' - AGAACGGCAAGGGCTACTTC
Sequence	AV836208
PCR size	408