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GrainGenes Marker Report: k03923

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Locus	k03923
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 295
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah29b02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 14 ] SNP = A/G SNP structure (UNICODE) = ACTTCTTGCCRTCAGTGCTTG Parent 1 SNP sequence = ACTTCTTGCCATCAGTGCTTG Parent 2 SNP sequence = ACTTCTTGCCGTCAGTGCTTG SNP = T/C SNP structure (UNICODE) = TTAAGCCAAGYTCAGTACTGG Parent 1 SNP sequence = TTAAGCCAAGTTCAGTACTGG Parent 2 SNP sequence = TTAAGCCAAGCTCAGTACTGG SNP structure (UNICODE) = ATCTGCTGACYGATTCACCAA Parent 1 SNP sequence = ATCTGCTGACTGATTCACCAA Parent 2 SNP sequence = ATCTGCTGACCGATTCACCAA SNP structure (UNICODE) = AGCATACCAARATTTTTAGGT Parent 1 SNP sequence = AGCATACCAAAATTTTTAGGT Parent 2 SNP sequence = AGCATACCAAGATTTTTAGGT
Probe for Locus	bah29b02
Locus	k03923
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = pollen signalling protein with adenylyl cyclase activity [Zea mays]
Type	PCR
PCR primers	Left 5' - CAGAACGAGGACTACCGCTC Right 5' - CCAGTAGGTGCCCATCTTGT
Sequence	AV945939
PCR size	385