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GrainGenes Marker Report: k03718

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Locus	k03718
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 75.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah19e08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = T/A SNP structure (UNICODE) = GTCGCCGGAGWGGGAAATGCA Parent 1 SNP sequence = GTCGCCGGAGTGGGAAATGCA Parent 2 SNP sequence = GTCGCCGGAGAGGGAAATGCA SNP = A/G SNP structure (UNICODE) = CGCTGGAGCCRAAAACGGGCT Parent 1 SNP sequence = CGCTGGAGCCAAAAACGGGCT Parent 2 SNP sequence = CGCTGGAGCCGAAAACGGGCT
Probe for Locus	bah19e08
Locus	k03718
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = probable GTP-binding protein (extra large) [imported] - Arabidopsis thaliana
Type	PCR
PCR primers	Left 5' - GAAGACGTTGGTGGCAATTT Right 5' - GCGTAATTTGGACAGGGCTA
Sequence	AV943891
PCR size	387