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GrainGenes Marker Report: k03569

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Locus	k03569
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 290.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bah13i10
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = A/G SNP structure (UNICODE) = AGGCTTTCAARGGCTTGAAGT Parent 1 SNP sequence = AGGCTTTCAAAGGCTTGAAGT Parent 2 SNP sequence = AGGCTTTCAAGGGCTTGAAGT SNP = C/T SNP structure (UNICODE) = TCGATTACTAYCTGAGACTGC Parent 1 SNP sequence = TCGATTACTACCTGAGACTGC Parent 2 SNP sequence = TCGATTACTATCTGAGACTGC SNP structure (UNICODE) = CTCGGCCTGTYGAATAACCAT Parent 1 SNP sequence = CTCGGCCTGTCGAATAACCAT Parent 2 SNP sequence = CTCGGCCTGTTGAATAACCAT
Probe for Locus	bah13i10
Locus	k03569
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = OSJNBa0064G10.3 [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - TTTTCTCCTCTGACCCCTCC Right 5' - GAGGCTGAGGACCGAGTTTT
Sequence	AV835621
PCR size	412