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GrainGenes Marker Report: k03405

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Locus	k03405
Type	SNP
Chromosome	2H
Map	Hv-HNxH602-2H 96.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags7i05
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 16 ] SNP = A/G SNP structure (UNICODE) = AAAAGGGATGRTGGAATACAA Parent 1 SNP sequence = AAAAGGGATGATGGAATACAA Parent 2 SNP sequence = AAAAGGGATGGTGGAATACAA SNP = C/T SNP structure (UNICODE) = CGGGTTCAGGYTTGGGCTCTG Parent 1 SNP sequence = CGGGTTCAGGCTTGGGCTCTG Parent 2 SNP sequence = CGGGTTCAGGTTTGGGCTCTG SNP = C/A SNP structure (UNICODE) = ATCAATTGTCMGTCATCGGCG Parent 1 SNP sequence = ATCAATTGTCCGTCATCGGCG Parent 2 SNP sequence = ATCAATTGTCAGTCATCGGCG SNP = A/T SNP structure (UNICODE) = CAAGGAATGCWAAAAAGATGC Parent 1 SNP sequence = CAAGGAATGCAAAAAAGATGC Parent 2 SNP sequence = CAAGGAATGCTAAAAAGATGC
Probe for Locus	bags7i05
Locus	k03405
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - TGTGCACTGTTTTAATCCCTTG Right 5' - AAACGGAGCACTTGTTCCAC
Sequence	AV928555
PCR size	360