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GrainGenes Marker Report: k03302

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Locus	k03302
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 24.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags3m02
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = GCGCAGCACCRCCGGACCCGA Parent 1 SNP sequence = GCGCAGCACCACCGGACCCGA Parent 2 SNP sequence = GCGCAGCACCGCCGGACCCGA SNP = T/C SNP structure (UNICODE) = CTTCTCTCTCYTCCCTTCCTT Parent 1 SNP sequence = CTTCTCTCTCTTCCCTTCCTT Parent 2 SNP sequence = CTTCTCTCTCCTCCCTTCCTT
Probe for Locus	bags3m02
Locus	k03302
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein [Oryza sativa (japonica cultivar-group)]
Type	PCR
PCR primers	Left 5' - ACCTCAATCCAATCCATCCA Right 5' - CTCCGTTCGAGGAGACTGAC
Sequence	AV834593
PCR size	369