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GrainGenes Marker Report: k03221

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Locus	k03221
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 41.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags39e16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 11 ] SNP = T/C SNP structure (UNICODE) = TGTATAGCTTYATGAGGATAG Parent 1 SNP sequence = TGTATAGCTTTATGAGGATAG Parent 2 SNP sequence = TGTATAGCTTCATGAGGATAG SNP structure (UNICODE) = TTTTGAGTGGYTGGCATAGTT Parent 1 SNP sequence = TTTTGAGTGGTTGGCATAGTT Parent 2 SNP sequence = TTTTGAGTGGCTGGCATAGTT SNP = T/G SNP structure (UNICODE) = CAGGAAATAGKTTTTGAGGGG Parent 1 SNP sequence = CAGGAAATAGTTTTTGAGGGG Parent 2 SNP sequence = CAGGAAATAGGTTTTGAGGGG
Probe for Locus	bags39e16
Locus	k03221
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = 14-3-3 protein homolog - barley emb CAA44259.1 14-3-3 protein homologue [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - TTCACCAGCTCGGGATAGTC Right 5' - GGAAAGTGGCGGTCTAGGTT
Sequence	BJ551813
PCR size	358