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GrainGenes Marker Report: k03220

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Locus	k03220
Type	SNP
Chromosome	1H
Map	Hv-HNxH602-1H 201.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags39d12
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = A/G SNP structure (UNICODE) = ATGTCCAAAARGAAAGTCAGC Parent 1 SNP sequence = ATGTCCAAAAAGAAAGTCAGC Parent 2 SNP sequence = ATGTCCAAAAGGAAAGTCAGC SNP = G/T SNP structure (UNICODE) = TCATGGTACAKAAATCTTACA Parent 1 SNP sequence = TCATGGTACAGAAATCTTACA Parent 2 SNP sequence = TCATGGTACATAAATCTTACA SNP = T/C SNP structure (UNICODE) = TTACTTGTTTYGTTGATAGAC Parent 1 SNP sequence = TTACTTGTTTTGTTGATAGAC Parent 2 SNP sequence = TTACTTGTTTCGTTGATAGAC
Probe for Locus	bags39d12
Locus	k03220
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = kinesin motor protein-related [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TGAACCCACCCAATAAAAGC Right 5' - GTTGTCAAGGCATTCAGCAG
Sequence	BJ468529
PCR size	392