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GrainGenes Marker Report: k03209

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Locus	k03209
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 115.8
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags39e15
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 19 ] SNP = T/A SNP structure (UNICODE) = ATGTACCTTTWTCTGGGTTAG Parent 1 SNP sequence = ATGTACCTTTTTCTGGGTTAG Parent 2 SNP sequence = ATGTACCTTTATCTGGGTTAG SNP = A/G SNP structure (UNICODE) = CTTGATGACCRTTACGTTCAT Parent 1 SNP sequence = CTTGATGACCATTACGTTCAT Parent 2 SNP sequence = CTTGATGACCGTTACGTTCAT SNP structure (UNICODE) = GTTGGTTAAGRTTATGATGAA Parent 1 SNP sequence = GTTGGTTAAGATTATGATGAA Parent 2 SNP sequence = GTTGGTTAAGGTTATGATGAA SNP = T/C SNP structure (UNICODE) = TTAGGAGGATYTGTTAGTGGA Parent 1 SNP sequence = TTAGGAGGATTTGTTAGTGGA Parent 2 SNP sequence = TTAGGAGGATCTGTTAGTGGA SNP = C/A SNP structure (UNICODE) = AAATCATCGAMCCAGCAGTCA Parent 1 SNP sequence = AAATCATCGACCCAGCAGTCA Parent 2 SNP sequence = AAATCATCGAACCAGCAGTCA
Probe for Locus	bags39e15
Locus	k03209
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - ACCGCTTTCTCCACCTTTTT Right 5' - ATTTCGTGGTGGCACTAAGG
Sequence	BJ468550
PCR size	361