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GrainGenes Marker Report: k03206

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Locus	k03206
Type	CAPS
Chromosome	7H
Map	Hv-HNxH602-7H 293.4
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags38n21
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = XhoI SNP = C/T SNP structure (UNICODE) = AGAGCCCGCTYGAGTTTACAC Parent 1 SNP sequence = AGAGCCCGCTCGAGTTTACAC Parent 2 SNP sequence = AGAGCCCGCTTGAGTTTACAC Recognized sequence for CAPs locus = CTCGAG
Probe for Locus	bags38n21
Locus	k03206
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = kaurene synthase A - maize gb AAA73960.1 kaurene synthase A
Type	PCR
PCR primers	Left 5' - ACGCTTCGTCCATGAACTCT Right 5' - ATTAACTGAGGTCGCCATGC
PCR size	431