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GrainGenes Marker Report: k03192

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Locus	k03192
Type	SNP
Chromosome	5H
Map	Hv-HNxH602-5H 181.7
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags3e06
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/A SNP structure (UNICODE) = TCCCAAAGAARAAGAGCGCCT Parent 1 SNP sequence = TCCCAAAGAAGAAGAGCGCCT Parent 2 SNP sequence = TCCCAAAGAAAAAGAGCGCCT SNP = T/C SNP structure (UNICODE) = ATATGATACAYTAGGCATCAC Parent 1 SNP sequence = ATATGATACATTAGGCATCAC Parent 2 SNP sequence = ATATGATACACTAGGCATCAC
Probe for Locus	bags3e06
Locus	k03192
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ESTs AU032852(S15362),AU070591(S5037) correspond to a region of the predicted gene.~Similar to Caenorhabditis elegans cosmid
Type	PCR
PCR primers	Left 5' - GCCCATGAGACTCAAGCAAT Right 5' - GCCGAGGCACTAATCCATAA
Sequence	AV922245
PCR size	381