GrainGenes Marker Report: k03087
Locus
k03087
Type
SNP
Chromosome
5H
Map
Hv-HNxH602-5H 199
[ Show Nearby Loci ]
Map Data
Barley, HN x H602, Sato2009
Species
Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe
bags37e01
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark
[ Hide all but 1 of 7 ] SNP = T/C SNP structure (UNICODE) = AGCTCTGGGGYGCAGATTTCC Parent 1 SNP sequence = AGCTCTGGGGTGCAGATTTCC Parent 2 SNP sequence = AGCTCTGGGGCGCAGATTTCC SNP structure (UNICODE) = GTCATTCATCYTCTCTTTTGA Parent 1 SNP sequence = GTCATTCATCTTCTCTTTTGA Parent 2 SNP sequence = GTCATTCATCCTCTCTTTTGA
Probe for Locus
bags37e01
Locus
k03087
Reference
Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks
Best BLAST Hit = P0577B11.20 [Oryza sativa (japonica cultivar-group)]
Type
PCR
PCR primers
Left 5' - CCTGATCAACTGGCTGGATT
Right 5' - GCTCTTGCAAGGATGGAAAG
Sequence
BJ468133
PCR size
478
GrainGenes Marker Report: k03087
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