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GrainGenes Marker Report: k03034

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Locus	k03034
Type	CAPS
Chromosome	4H
Map	Hv-HNxH602-4H 18.6
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags35i24
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 6 ] Restriction enzyme used for CAPS analysis = HapII SNP = A/G SNP structure (UNICODE) = AGAATTTGCCRGTCTCTCCAT Parent 1 SNP sequence = AGAATTTGCCAGTCTCTCCAT Parent 2 SNP sequence = AGAATTTGCCGGTCTCTCCAT Recognized sequence for CAPs locus = CCGG
Probe for Locus	bags35i24
Locus	k03034
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = G protein beta subunit [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - CTCATCAACCGCGAGAAAAT Right 5' - CAGCTTTGATTCAGCCAACA
Sequence	BJ467013
PCR size	355