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GrainGenes Marker Report: k02011

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Locus	k02011
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 236.2
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	bags10f16
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = A/G SNP structure (UNICODE) = CAAAGGACTCRATGACGGGGA Parent 1 SNP sequence = CAAAGGACTCAATGACGGGGA Parent 2 SNP sequence = CAAAGGACTCGATGACGGGGA SNP = T/C SNP structure (UNICODE) = TGCTTGAGAAYCCAAAGGACT Parent 1 SNP sequence = TGCTTGAGAATCCAAAGGACT Parent 2 SNP sequence = TGCTTGAGAACCCAAAGGACT
Probe for Locus	bags10f16
Locus	k02011
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = elongation factor [Triticum aestivum]
Type	PCR
PCR primers	Left 5' - ATCAGATCGGTCTCCAATGC Right 5' - ACCGTCGCCGTAAGATACAT
Sequence	AV917540
PCR size	350