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GrainGenes Marker Report: k01503

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Locus	k01503
Type	SNP
Chromosome	6H
Map	Hv-HNxH602-6H 174.1
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal9c20
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = C/T SNP structure (UNICODE) = CACACAAAATYTCACGATGTC Parent 1 SNP sequence = CACACAAAATCTCACGATGTC Parent 2 SNP sequence = CACACAAAATTTCACGATGTC SNP = A/T SNP structure (UNICODE) = GTATGGGGCAWGGAGGGAAGA Parent 1 SNP sequence = GTATGGGGCAAGGAGGGAAGA Parent 2 SNP sequence = GTATGGGGCATGGAGGGAAGA SNP = A/G SNP structure (UNICODE) = TGTTACCGTGRTTTCTCATCT Parent 1 SNP sequence = TGTTACCGTGATTTCTCATCT Parent 2 SNP sequence = TGTTACCGTGGTTTCTCATCT
Probe for Locus	baal9c20
Locus	k01503
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = ABC transporter family protein [Arabidopsis thaliana] gb AAN72026.1 ABC transporter protein, putative [Arabidopsis thaliana]
Type	PCR
PCR primers	Left 5' - TACATCCTTGGAGAGCCTGG Right 5' - TTCAAGTATGCCGAGTGCAG
Sequence	AV937093
PCR size	403