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GrainGenes Marker Report: k01425

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Locus	k01425
Type	SNP
Chromosome	7H
Map	Hv-HNxH602-7H 107.9
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baal5n08
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 8 ] SNP = G/T SNP structure (UNICODE) = TCGGGACATAKCTGGTGGCGG Parent 1 SNP sequence = TCGGGACATAGCTGGTGGCGG Parent 2 SNP sequence = TCGGGACATATCTGGTGGCGG SNP = C/T SNP structure (UNICODE) = TTTTTACAGGYGACTTGCTTC Parent 1 SNP sequence = TTTTTACAGGCGACTTGCTTC Parent 2 SNP sequence = TTTTTACAGGTGACTTGCTTC
Probe for Locus	baal5n08
Locus	k01425
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
General Remarks	Best BLAST Hit = hypothetical protein - barley (fragment) emb CAA03962.1 unnamed protein product [Hordeum vulgare subsp. vulgare]
Type	PCR
PCR primers	Left 5' - TTCGCACCTAAGCTTGACCT Right 5' - CTATGGACTCGCTCAGGCTC
Sequence	AV936761
PCR size	433