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GrainGenes Marker Report: k00546

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Locus	k00546
Type	SNP
Chromosome	4H
Map	Hv-HNxH602-4H 137
	[ Show Nearby Loci ]
Map Data	Barley, HN x H602, Sato2009
Species	Hordeum vulgare Hordeum vulgare subsp. spontaneum
Probe	baak33c22
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Remark	[ Hide all but 1 of 12 ] SNP = G/A SNP structure (UNICODE) = ATGAATAAGCRAAGTACGACA Parent 1 SNP sequence = ATGAATAAGCGAAGTACGACA Parent 2 SNP sequence = ATGAATAAGCAAAGTACGACA SNP = T/C SNP structure (UNICODE) = CATGGTTAAAYACTCTGGTAC Parent 1 SNP sequence = CATGGTTAAATACTCTGGTAC Parent 2 SNP sequence = CATGGTTAAACACTCTGGTAC SNP = C/G SNP structure (UNICODE) = ATCTCAAAAGSGTCGTGTACC Parent 1 SNP sequence = ATCTCAAAAGCGTCGTGTACC Parent 2 SNP sequence = ATCTCAAAAGGGTCGTGTACC
Probe for Locus	baak33c22
Locus	k00546
Reference	Sato K et al. (2009) A high-density transcript linkage map of barley derived from a single population. Heredity 103:110-117.
Type	PCR
PCR primers	Left 5' - AGGCAGGCAGATACAGCAAT Right 5' - GTCTCAACTGCAAGACGGTG
Sequence	BJ451221
PCR size	352