GrainGenes Marker Report: cdo484a
Locus
cdo484a
Type
RFLP
Map
Oat-2004-TxM_18 17 Oat-KxO/2003-22_44+18 93.2 RGA-2013_KO22_44_18 93
[ Show Nearby Loci ]
QTL with Locus Marker
QBN-A.TxM-18 QTK-A.TxM-18
Map Data
Oat, KxO, 2003 Oat-2004-TxM Oat-2013-KxO-RGA
Probe
CDO484
Homology
NP_033047.1 e-value: 3.8 retinoic acid induced 1 [Mus musculus] BAA92155.1 e-value: 0.50 (AB007818) glycine-rich protein [Citrus unshiu]
Remark
Marker placement value = 0.00 cM on map Oat-KxO/2003-22_44+18 Marker is a framework marker on map Oat-KxO/2003-22_44+18
Possible Orthologs
CDO484
[ Show all 15 ]
Probe for Locus
CDO484
Locus
CDO484
[ Show all 18 ]
Synonym
Synonym HAR35_16073 HAR35_16075
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c] OatUni-ZAPXR
Type
cDNA
Sequence
[ Hide all but 1 of 6 ] BE439064 BE439115 CDO484_WHE2G0071 CDO484_WHE2G0072 CDO484-5 CDO484-3
Polymorphism
CDO484 EcoRI CDO484 EcoRV
Linkage Group
2DL, 4AL, 5BL, 2L4L5L[b 7L]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: cdo484a
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