GrainGenes Marker Report: cMWG716a
Locus
cMWG716a
Type
RFLP
Chromosome
5H
Map
Barley-Consensus2-5H 140.8
[ Show all 7 ]
[ Show Nearby Loci ]
Map Data
[ Hide all but 1 of 7 ] Barley consensus 2 Barley, BinMap 2005 Barley, Consensus 2006, Marcel Barley, Consensus 2007, SSR Barley, Consensus 2023, FHB Barley, Integrated, Marcel 2009 Barley, IxF
Species
Hordeum vulgare
Probe
cMWG716
Reference
Varshney RK et al. (2007) A high density barley microsatellite consensus map with 775 SSR loci. Theoretical and Applied Genetics 114:1091.
Data Source
Kleinhofs, Andris
Remark
This marker is a Binlocus in the Hordeum-Bins maps, i.e. a marker mapped in other crosses and located to the Steptoe x Morex bin Bin on the 'Barley, Integrated, Marcel 2009' Map Set : 'chromosome_kleinhofs & graner BIN nb.subBIN nb' Mapping population(s) used for locus placement on the 'Barley, Integrated, Marcel 2009' Map Set = Igri x Franka Loci in 'Barley, Consensus 2006, Marcel' mapped in population(s) : Igri x Franka Locus in 'Barley, Consensus 2007, SSR' was a BIN marker in 'Barley, Consensus 2006, Marcel'
Possible Orthologs
cMWG716 cMWG716a-5H cMWG716b cMWG716b-6H
Probe for Locus
cMWG716
Locus
cMWG716a
[ Show all 18 ]
Reference
Graner A et al. (1991) Construction of an RFLP map of barley Theoretical and Applied Genetics 83:250-256.
Type
cDNA STS
STS primers
5' CCTGGGAGGTGAAGTTGGCT
5' GACCAGATCAACGAGCCCAA
STS size
335
Amplification Conditions
STS annealing temperature 55-58 oC
Sequence
AJ234435 AJ234434 CMWG716-5 CMWG716-3
DNA Library
cMWG
Source Species
Hordeum vulgare
Source Tissue
Leaf
GrainGenes Marker Report: cMWG716a
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