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GrainGenes Marker Report: bcd808a

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Locus	bcd808a
Type	RFLP
Chromosome	1H
Map	Barley-consensus-2003-1H 87.5 [ Show all 6 ]
	[ Show Nearby Loci ]
QTL with Locus Marker	QPRO.OxM-QTL4_10
Map Data	Barley consensus 2003 [ Show all 6 ]
Probe	BCD808
Homology	NP_013059.1 e-value: 2.9 Succinate dehydrogenase (ubiquinone) iron-sulfur protein subunit; Sdh2p [Saccharomyces cerevisiae] MITOCHONDRIAL PRECURSOR (IP) protein precursor - yeast (Saccharomyces cerevisiae) 1.3.99.1) [Saccharomyces cerevisiae] TBA_WHEAT e-value: 9e-50 TUBULIN ALPHA CHAIN
Reference	Wenzl P et al. (2006) A high-density consensus map of barley linking DArT markers to SSR, RFLP and STS loci and agricultural traits BMC Genomics 7:206.
Data Source	Langridge, Peter J.
Remark	Number of populations contributing to the placement of BCD808a in the Barley, Consensus 2006 DArT maps = 1 Marker placement value = 4.73 cM on map Oat-KxO/2003-7_10_28 Marker is not a framework marker on map Oat-KxO/2003-7_10_28
Possible Orthologs	BCD808 [ Show all 28 ]
Probe for Locus	BCD808
Locus	[ Hide all but 1 of 46 ] Xbcd808-1 BCD808 Xbcd808A bcd808a bcd808b bcd808c bcd808d Xbcd808-1A RI005K6 HD020D12 HD022H8 HD057D1 HI088J17 HD067P8 HI068C2 HD055E16 RI019A8 HD096I6 HI050M23 HI016O11 HI016O10 D1.1_ctg5162_2 D1.1_ctg5357_2 D1.1_ctg5368_2 D1.1_ctg7063 Xbcd808 Xbcd808-1A.1 Xbcd808-1A.2 Xbcd808B Xbcd808.2 Xbcd808-1S Xbcd808.1 Xbcd808-1B BCD808b-4H BCD808(C) BCD808(B) bcd808 BCD808(A) bcd808.1 BCD808A BCD808B BCD808C BCD808D Xbcd808_2 bcd808-1A.1 bcd808-1A.2
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library Bar.LambZAPII [c]
Type	cDNA
Sequence	BE438617 BE438742 BCD808_WHE1G0031 BCD808_WHE1G0032
Polymorphism	BCD808 EcoRV BCD808 EcoRI
Linkage Group	1L, 4L
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	0.8
PCR size	0.8