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GrainGenes Marker Report: Xpsr151(GapA)

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Locus
Xpsr151(GapA)
Type
RFLP
Probe
PSR151
Possible Orthologs
Xpsr151
Xpsr151-2A
Xpsr151-2B
Xpsr151-2D



Probe for Locus
PSR151
Locus
Xpsr151-2A
Xpsr151-2B
Xpsr151-2D
Xpsr151(GapA)
Xpsr151
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
General Remarks
Polymorphism scores are given as the percent polymorphic pairwise comparisons, followed by the number of alleles found and number of varieties tested in parentheses.
Type
cDNA
Sequence
PSR151 Forward
PSR151 Reverse
Copy Number
1
Background
2
Cross hybridizes to
Secale cerealegood
Hordeum vulgaregood
Polymorphism
[ Hide all but 1 of 16 ]
PSR151 H EcoRI0.0 (1, 13)
PSR151 H EcoRV46.2 (2, 13)
PSR151 H DraI0.0 (1, 4)
PSR151 H HindIII0.0 (1, 12)
PSR151 2D DraI2D 37.8 (3, 10)
PSR151 2A DraI2A 35.6 (2, 10)
PSR151 2B DraI2B 0.0 (1, 10)
PSR151 2D EcoRV2D 36.2 (3, 15)
PSR151 2A EcoRV2A 25.7 (3, 15)
PSR151 2B EcoRV2B 13.3 (2, 15)
PSR151 2D HindIII2D 0.0 (1, 15)
PSR151 2B HindIII2B 13.3 (2, 15)
PSR151 2A HindIII2A 0.0 (1, 15)
PSR151 R EcoRI
PSR151 R EcoRV
PSR151 R HindIII
Gel
PSR151 Gale
Linkage Group
2AL
2BL
2DL
2RL
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
Source Tissue
Leaf
Insert Size
1.35