GrainGenes Marker Report: Xgwm293-5A
Locus
Xgwm293-5A
Type
Microsatellite
Chromosome
5A
Chromosome Arm
5AS
Map
Chinese_Spring_Deletion_SSR_5A -0.575
[ Show all 7 ]
[ Show Nearby Loci ]
Breakpoint Interval
5AS1-0.40-0.75
Map Data
Durum wheat, Kofa x UC1113
[ Show all 7 ]
Probe
WMS293
Reference
Data Source
Roeder, Marion S. 98.09.15
Remark
In Map Ta-Synthetic/Opata-SSR-5A, the interval most likely to contain locus is between Xgwm304 and Xbcd1871
Possible Orthologs
Xgwm293
[ Show all 10 ]
Probe for Locus
WMS293
Locus
[ Hide all but 1 of 11 ] Xgwm293-5A Xgwm293 Xgwm293-5A.1 Xgwm293-5A.2 Xgwm293-5B Xgwm293-5D Xgwm293c Xgwm293-7B gwm293 gwm293-5A gwm293b
Reference
Roder MS et al. (1998) A microsatellite map of wheat Genetics 149:2007-2023.
General Remarks
Insert contains repeat (CA)24 PRIMER SEQUENCE IS AVAILABLE FOR PUBLIC RESEARCH ONLY. REQUESTS FOR COMMERCIAL USE SHOULD BE DIRECTED TO M. ROEDER.
Type
PCR SSR
PCR primers
5' TACTGGTTCACATTGGTGCG 3'
5' TCGCCATCACTCGTTCAAG 3'
Amplification Conditions
3 min at 94 deg C; 45 cycles with 1 min at 94 deg C, 1 min at 55 deg C, and 2 min at 72 deg C; and a final extension step of 10 min at 72 deg C
Polymorphism
WMS293
Source Species
Triticum aestivum
Source Germplasm
Chinese Spring
GrainGenes Marker Report: Xgwm293-5A
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