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GrainGenes Marker Report: Xcfd22.1

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Locus
Xcfd22.1
Type
Microsatellite
Map
Ta-NxW-1B169
[ Show Nearby Loci ]
Map Data
Wheat, Nanda2419 x Wangshuibai
Probe
CFD22
Possible Orthologs
[ Hide all but 1 of 9 ]
Xcfd22
Xcfd22-1A
Xcfd22-7B
Xcfd22.2
cfd22
Xcfd22-4A
cfd22-4B
cfd22-1A
cfd22-7B



Probe for Locus
CFD22
Locus
Xcfd22-4B
[ Show all 10 ]
Reference
ReferenceGuyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks
Quality Score = D
Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems)
Amplifies motif: (GA)28
Regularity of motif is imperfect
Type
PCR
SSR
PCR primers
Forward 5' GGTTGCAAACCGTCTTGTTT 3'
Reverse 5' AGTCGAGTTGCGACCAAAGT 3'
SSR size
254
Amplification Conditions
5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group
4B
Source Species
Aegilops tauschii