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GrainGenes Marker Report: Xcfd19c

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Locus	Xcfd19c
Type	Microsatellite
Chromosome	1D 5D
Map	Wheat-Composite2004-1D 111 Wheat-Composite2004-5D 72
	[ Show Nearby Loci ]
Map Data	Wheat, Composite, 2004
Probe	CFD19
Possible Orthologs	[ Hide all but 1 of 11 ] Xcfd19 Xcfd19-1D Xcfd19-5D Xcfd19-6D Xcfd19-6D.1 Xcfd19-6D.2 Xcfd19a cfd19 cfd19-1D cfd19-5D cfd19-6D
Probe for Locus	CFD19
Locus	Xcfd19-1D [ Show all 12 ]
Reference	Guyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks	Quality Score = D Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (GA)18 Regularity of motif is perfect
Type	PCR SSR
PCR primers	Forward 5' TACGCAGGTTTGCTGCTTCT 3' Reverse 5' GGAGTTCACAAGCATGGGTT 3'
SSR size	267
Amplification Conditions	5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group	1D/5D/6D
Source Species	Aegilops tauschii