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GrainGenes Marker Report: Xcfd15-1A

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Locus	Xcfd15-1A
Type	Microsatellite
Chromosome	1A
Map	Louise/Penawawa-1A 25 Ta-Courtot/CS-GPW-1A 15.1 Ta-SSR-2004-1A 24.6
	[ Show Nearby Loci ]
Map Data	Wheat, Consensus SSR, 2004 Wheat, Courtot x Chinese Spring, GPW Wheat, Louise x Penawawa
Probe	CFD15
Reference	Somers DJ et al. (2004) A high-density wheat microsatellite consensus map for bread wheat (Triticum aestivum L.) Theoretical and Applied Genetics 109:1105-1114.
Possible Orthologs	Xcfd15 [ Show all 9 ]
Probe for Locus	CFD15
Locus	[ Hide all but 1 of 11 ] Xcfd15-1A Xcfd15-1D Xcfd15 Sr33 cfd15 cfd15(2) Xcfd15-1B cfd15-1A.1 cfd15-1A.2 cfd15-1D cfd15-1A
Reference	Guyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks	Quality Score = B Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (CT)20(TGTA)3 Regularity of motif is perfect
Type	PCR SSR
PCR primers	Forward 5' CTCCCGTATTGAGCAGGAAG 3' Reverse 5' GGCAGGTGTGGTGATGATCT 3'
SSR size	179
Amplification Conditions	5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group	1A/1D
Source Species	Aegilops tauschii