Query (optional)   in Class  All Allele Author Colleague Collection Assembly Gene Gene Class Gene Product Germplasm Image Journal Keyword Library Locus Map Map Data Marker Pathology Polymorphism Probe Protein QTL Rearrangement Reference Sequence Species Trait Trait Study Two Point Data  

---

GrainGenes Marker Report: Xcfd11.2

[Submit comment/correction]

Locus	Xcfd11.2
Type	Microsatellite
Map	Ta-NxW-2B 102.7
	[ Show Nearby Loci ]
Map Data	Wheat, Nanda2419 x Wangshuibai
Probe	CFD11
Possible Orthologs	Xcfd11-2B Xcfd11-2D Xcfd11.1 Xcfd11a Xcfd11b
Probe for Locus	CFD11
Locus	[ Hide all but 1 of 6 ] Xcfd11-2D Xcfd11-2B Xcfd11.2 Xcfd11.1 Xcfd11b Xcfd11a
Reference	Guyomarc'h H et al. (2002) Characterisation of polymorphic microsatellite markers from Aegilops tauschii and transferability to the D-genome of bread wheat Theoretical and Applied Genetics 104:1164-1172.
General Remarks	Quality Score = B Quality scores reflect the quality of amplification (from A very good quality to D multiple banding pattern : A and B can be used on capillary systems) Amplifies motif: (CA)31 Regularity of motif is imperfect
Type	PCR SSR
PCR primers	Forward 5' GGATTTGCCTTGGATTTGAA 3' Reverse 5' TTGCATCTCACGCACCTAAG 3'
SSR size	167
Amplification Conditions	5 minutes at 94 degrees; 30 cycles (94 degrees for 30 seconds; 60 degrees for 30 seconds; 72 degrees for 30 seconds); 10 minutes at 72 degrees
Linkage Group	2D/2B
Source Species	Aegilops tauschii