GrainGenes Marker Report: Xcdo99-1B
Locus
Xcdo99-1B
Type
RFLP
Chromosome
1B
Chromosome Arm
1BS
Map
Ta-Courtot/CS-GPW-1B 24.6 Ta-Gale-1B -22.4
[ Show Nearby Loci ]
Map Data
Wheat, Courtot x Chinese Spring, GPW Wheat, Gale
Probe
CDO99
Homology
BAB01753.1 e-value: 0.46 (AP000603) gb|AAD10646.1~gene_id:MRP15.12~strong similarity to unknown protein [Arabidopsis thaliana]
Possible Orthologs
CDO099
[ Show all 11 ]
Probe for Locus
CDO99
Locus
CDO99
[ Show all 12 ]
Synonym
Synonym HAR35_2446 HAR35_47059
Related Probe
BCD98
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Uni-ZAP XR library OatUni-ZAPXR [c]
Type
cDNA
Sequence
[ Hide all but 1 of 7 ] BE439326 BE439358 CDO99_WHE05D09.s1 AI978357 AI978279 CDO099-5 CDO099-3
Polymorphism
CDO99 DraI CDO99 EcoRI CDO99 EcoRV
Linkage Group
1S,7S [b 5H]
Insert Enzyme
EcoRI XhoI
Source Species
Avena sativa
Source Germplasm
Brooks (oat)
Source Tissue
etiolated leaf
Insert Size
2.1
PCR size
2.1
GrainGenes Marker Report: Xcdo99-1B
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