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GrainGenes Marker Report: Xbcd98-1R

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Locus	Xbcd98-1R
Type	RFLP
Chromosome	1R
Map	Secale-N6xN2-2004-1R 27.5 Secale-N7xN2-2004-1R 13.8 Secale-N7xN6-2004-1R 6.9
	[ Show Nearby Loci ]
Map Data	Rye, N6 x N2, 2004 Rye, N7 x N2, 2004 Rye, N7 x N6, 2004
Species	Secale cereale
Probe	BCD98
Homology	AAF35955.1 e-value: 3e-42 (AC024128) unknown protein [Arabidopsis thaliana] AAF35955.1 e-value: 2e-46 (AC024128) unknown protein [Arabidopsis thaliana]
Reference	Khlestkina EK et al. (2004) Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags Theoretical and Applied Genetics 109:725-732.
Possible Orthologs	[ Hide all but 1 of 23 ] BCD098 BCD98 BCD098-1H BCD098A BCD98B Xbcd98 Xbcd98-1 Xbcd98-1A Xbcd98-1A.1 Xbcd98-1A.2 Xbcd98-1B Xbcd98-1D Xbcd98-1U Xbcd98-5A Xbcd98-7B Xbcd98.1 Xbcd98.2 Xbcd98A Xbcd98B Xcnl.BCD98 bcd98 bcd98-1A bcd98-7B
Probe for Locus	BCD98
Locus	BCD98 [ Show all 29 ]
Related Probe	CDO99
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library Bar.LambZAPII [c] Bar.LambZAPII
Type	cDNA
Sequence	BE438826 [ Show all 8 ]
Polymorphism	BCD98 EcoRI Durums BCD98 EcoRI BCD98 XbaI
Linkage Group	1S, 7S, 5H 1S,7S[b 5LS]
Insert Enzyme	EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
Insert Size	1.3
PCR size	1.3