GrainGenes Marker Report: Xbcd855
Locus
Xbcd855
Type
RFLP
Chromosome
2D
Chromosome Arm
2DS
Map
Oat-2007-OxT_6 17 Ta-Physical-Gill-2ABD -52 Ta-Physical-Gill-2D -3.08
[ Show Nearby Loci ]
Breakpoint Interval
0/2DS-3 2S-0.51-0.53
Map Data
Oat-2007-OxT-PcQTL Wheat, Physical
Species
Triticum aestivum
Probe
BCD855
Homology
AAG37879.1 e-value: 7e-11 (AF303397) calmodulin-binding protein [Arabidopsis thaliana] AF096260_1 e-value: 3e-21 (AF096260) ER66 protein [Lycopersicon esculentum]
Reference
Boyko EV et al. (1999) A high-density genetic linkage map of Aegilops tauschii, the D-genome progenitor of bread wheat. Theoretical and Applied Genetics 99:16-26.
Possible Orthologs
[ Hide all but 1 of 8 ] bcd855 Xbcd855-2 Xbcd855-2A Xbcd855a Xbcd855b Xsts-bcd855 BCD855 Xsts-bcd955
Probe for Locus
BCD855
Locus
Xbcd855-2
[ Show all 11 ]
Synonym
Synonym HAR35_5518
Related Probe
BCD1086 BCD1307
Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c] Bar.LambZAPII
Type
cDNA
Sequence
BE438987 BE439016 BCD855_WHE05B08.s1 BCD855-5
Polymorphism
BCD855 EcoRI
Linkage Group
2S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
0.7
PCR size
0.7
GrainGenes Marker Report: Xbcd855
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