GrainGenes Marker Report: Xbcd372-3R
Locus
Xbcd372-3R
Type
RFLP
Chromosome
3R
Map
Secale-PxP-2004-3R 75.2
[ Show Nearby Loci ]
Map Data
Rye, P87 x P105, 2004
Species
Secale cereale
Probe
BCD372
Homology
NP_064092.1 e-value: 1.3 orf131 [Beta vulgaris] BAB01792.1 e-value: 1e-30 (AB026654) gb|AAC34345.1~gene_id:MVE11.2~strong similarity to unknown protein [Arabidopsis thaliana] BAB01792.1 e-value: 2e-60 (AB026654) gb|AAC34345.1~gene_id:MVE11.2~strong similarity to unknown protein [Arabidopsis thaliana]
Reference
Khlestkina EK et al. (2004) Mapping of 99 new microsatellite-derived loci in rye (Secale cereale L.) including 39 expressed sequence tags Theoretical and Applied Genetics 109:725-732.
Possible Orthologs
BCD372
[ Show all 14 ]
Probe for Locus
BCD372
Locus
[ Hide all but 1 of 15 ] Xbcd372-3A Xbcd372-3 Xbcd372-3D BCD372 Xbcd372B Xbcd372 Xbcd372.1 bcd372a bcd372b Xbcd372-3R bcd372 Xbcd372A bcd372-3A BCD372A BCD372B
Synonym
Synonym HAR35_15254 HAR35_15255
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c]
Type
cDNA
Sequence
BE438622 BE438665 BE438754 BCD372_WHE1A0071 BCD372_WHE1A0072
Polymorphism
BCD372 EcoRI
Linkage Group
3L
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf
Insert Size
1.5
PCR size
1.5
GrainGenes Marker Report: Xbcd372-3R
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