GrainGenes Marker Report: Xbcd327
Locus
Xbcd327
Type
RFLP
Chromosome
4D 4R
Chromosome Arm
4RS
Map
Oat-2001-KxO_22 0
[ Show all 12 ]
[ Show Nearby Loci ]
QTL with Locus Marker
Days to heading, KxO-22-b
Map Data
Oat, KxO
[ Show all 12 ]
Probe
BCD327
Homology
AF265208_1 e-value: 1.1 (AF265208) SWI-SNF complex protein p270 [Homo sapiens] T46060 e-value: 2e-08 hypothetical protein T18N14.20 - Arabidopsis thaliana
Reference
Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Remark
In the population 'T. monococcum, DV92 x G3116,' this locus was completely linked to Xpsr153, Xpsr920, Xabg484, Xbcd1262, Xbcd1006, XksuH8-4A, and Xcdo388-4A.
Possible Orthologs
[ Hide all but 1 of 7 ] BCD327 BCD327B Xbcd327-4B Xbcd327-4D bcd327 bcd327-4D bcd327x
Probe for Locus
BCD327
Locus
Xbcd327-4D
[ Show all 8 ]
Synonym
Synonym HAR35_28662 HAR35_35040 HAR35_4710
Reference
Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks
Lambda ZAP II library Bar.LambZAPII [c] Bar.LambZAPII
Type
cDNA STS
PCR primers
R:ACGAGCAGAAGCCAAGCCAA
L:GGCACGAGGCACAAACTTGA
Amplification Conditions
Anneal at 45oC
Sequence
BE438638 BE438695 BE438787 BCD327_WHE1A0121 BCD327_WHE1A0122
Polymorphism
BCD327 EcoRI
Linkage Group
4S
Insert Enzyme
EcoRI
Source Species
Hordeum vulgare
Source Germplasm
Willis
Source Tissue
etiolated leaf leaf
Insert Size
1.6
PCR size
1.6
GrainGenes Marker Report: Xbcd327
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