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GrainGenes Marker Report: Xbcd1716B

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Locus	Xbcd1716B
Type	RFLP
Map	Oat-KxO-20 23.1 Oat-KxO/AFLP-20 24 Oat-KxO/Q-20 23.1
	[ Show Nearby Loci ]
QTL with Locus Marker	BYDV, KxO-20 [ Show all 7 ]
Map Data	Oat, KxO Oat, KxO, AFLP Oat, KxO/QTL
Probe	BCD1716
Homology	AF159297_1 e-value: 5e-05 (AF159297) extensin-like protein [Zea mays] AF159296_1 e-value: 0.001 (AF159296) extensin-like protein [Lycopersicon esculentum]
Image	BCD1716 KO autoradiogram
Reference	Jin H et al. (2000) Combined AFLP and RFLP mapping in two hexaploid oat recombinant inbred populations Genome 94-101.
Possible Orthologs	[ Hide all but 1 of 14 ] bcd1716a BCD1716b Xbcd1716 Xbcd1716-6 Xbcd1716-6B Xbcd1716-6D Xbcd1716.2 Xbcd1716A BCD1716B BCD1716A bcd1716 BCD1716 bcd1716-6B bcd1716-6D
Probe for Locus	BCD1716
Locus	Xbcd1716-6 [ Show all 16 ]
Synonym	Other name BC1716 Synonym HAR35_14727 HAR35_14729 HAR35_14730
Related Probe	BCD357
	Hybridization_homologue: The two clones were isolated independently but exhibit the same RFLP patterns when hybridized to DNA from test genotypes, and thus are closely related in sequence.
Reference	Heun M et al. (1991) Construction of a restriction fragment length polymorphism map for barley (Hordeum vulgare) Genome 34:437-447.
General Remarks	Lambda ZAP II library
Type	cDNA
Sequence	BE438818 BE438840 BCD1716_WHE2B0021 BCD1716_WHE2B0022
Polymorphism	BCD1716 XbaI BCD1716 DraI BCD1716 EcoRI
Source Species	Hordeum vulgare
Source Germplasm	Willis
Source Tissue	etiolated leaf
PCR size	0.6